Gallery - Segmentation/ROI - anatomical accuracy evaluation -------------------------------------------------------------------- VisualQC's Freesufer module can be used to visualize the full cortical parcellation against the original MRI. Here, we show the use case for a single label (subcortical segmentation, tissue class or cortical ROI) - shown here is hippocampus: .. image:: vis/fs_filled/hippocampus_not_zoomed_in.png Focusing on multiple subcortical structures: .. image:: vis/fs_filled/subcortical_multiple.png And you can add as many ROIs as you like: .. image:: vis/fs_filled/subcortical_even_more.png ROIs could be from anywhere in the MRI (including big cortical labels too!). For example, let's look at posterior cingulate (label 1023 in Freesurfer ColorLUT) in the left hemi-sphere : .. image:: vis/fs_filled/lh-posteriorcingulate_1023.png And, how about insula? .. image:: vis/fs_filled/insula_1035.png You can also combine as many cortical ROIs as you wish and zoom in on them to get every detail you need to judge their accuracy: .. image:: vis/fs_filled/single_label_cortical_zoomed_in.png